BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C12SP1|AL427299
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig954 1891 0.0
>3x_Contig954
Length = 3755
Score = 1891 bits (951), Expect = 0.0
Identities = 991/1002 (98%), Gaps = 5/1002 (0%)
Strand = Plus / Plus
Query: 1 actcaagccgcttgatgatgctgcaaattcagtgctaactaaactcaacgacttttkgwt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1878 actcaagccgcttgatgatgctgcaaattcagtgctaactaaactcaacgacttttggaa 1937
Query: 61 cacaagtacttctccaacaccctcttcaccagagtatgaggatagatctcccagagatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 cacaagtacttctccaacaccctcttcaccagagtatgaggatagatctcccagagatca 1997
Query: 121 tcaagagatcgacgaacatacagccaccgttttggcacaacagatggagcataaagagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 tcaagagatcgacgaacatacagccaccgttttggcacaacagatggagcataaagagca 2057
Query: 181 agaaaatacacttcaaacattacagttgatgtttccggatttagacccagatcttattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 agaaaatacacttcaaacattacagttgatgtttccggatttagacccagatcttattcg 2117
Query: 241 agacgtatgcmtagctagcaaatacagagtcggtgtttgcgtagactcattgttagaaat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 agacgtatgcatagctagcaaatacagagtcggtgtttgcgtagactcattgttagaaat 2177
Query: 301 ggcagaatgattattaaacatttctttgggcgatttattaataatttcagccatctgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2178 ggcagaatgattattaaacatttctttgggcgatttattaataatttcagccatctgaat 2237
Query: 361 tatacattggagatccagtagcatgctcaagagaaatcgtttaagtgttaatactggtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2238 tatacattggagatccagtagcatgctcaagagaaatcgtttaagtgttaatactggtag 2297
Query: 421 tgaattgttaatgtatcctcacaatatcaacaccagcactgtccgtattagttacatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 tgaattgttaatgtatcctcacaatatcaacaccagcactgtccgtattagttacatttt 2357
Query: 481 gtgcaatgcacttatatagaacttacatttagtaccttcacaaaggggaagctgcccccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 gtgcaatgcacttatatagaacttacatttagtaccttcacaaaggggaagctgcccccg 2417
Query: 541 acgaatgagatagtgattgtmgtttcatcaagtttccatctattcgccaccagtgccacc 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 acgaatgagatagtgattgtagtttcatcaagtttccatctattcgccaccagtgccacc 2477
Query: 601 tatgcatgaccatacctcccatggaatttccaatcgtttcgaaactgtcatgtgacgttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 tatgcatgaccatacctcccatggaatttccaatcgtttcgaaactgtcatgtgacgttt 2537
Query: 661 tttcaaaatacatattgacgtgttcaatcgttaagaaatacaatctacgtatgctaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 tttcaaaatacatattgacgtgttcaatcgttaagaaatacaatctacgtatgctaaaat 2597
Query: 721 agcgataatgcccatgggttcccgcactaaaagaaagactctttcacttcacaagcttcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2598 agcgataatgcccatgggttcccgcactaaaagaaagactctttcacttcacaagcttcc 2657
Query: 781 tccttagtcatctaccgtgagtggtatatgtgttcataacaaaaatgctccggtgcttat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 tccttagtcatctaccgtgagtggtatatgtgttcataacaaaaatgctccggtgcttat 2717
Query: 841 tcacctatactgcctgtagtaaaagtgtcacttgatgattcccattccactttttctttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2718 tcacctatactgcctgtagtaaaagtgtcacttgatgattcccattccactttttctttt 2777
Query: 901 gagccaaaaaggtaccctagaaagaagaaaagag-aaataaaatcggttaatttatataa 959
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2778 gagcc-aaaaggtaccctagaaagaagaaaagagaaaataaaatcggttaatttatataa 2836
Query: 960 ggct-agattcaatcatttgatt--caatcatcagttagtaa 998
|||| |||||||||||||||||| ||||||||||||||||
Sbjct: 2837 ggctaagattcaatcatttgatttcaaatcatcagttagtaa 2878
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7279
Number of Sequences: 1807
Number of extensions: 7279
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)